Paper Search Console

Home Search Page About Contact

Journal Title

Title of Journal: J Mol Model

Search In Journal Title:

Abbravation: Journal of Molecular Modeling

Search In Journal Abbravation:

Publisher

Springer Berlin Heidelberg

Search In Publisher:

DOI

10.1002/asna.18891201906

Search In DOI:

ISSN

0948-5023

Search In ISSN:
Search In Title Of Papers:

The interaction of CClSubscript4/Subscript wit

Authors: Rhuiago M de Oliveira Luiz F Roncaratti Luiz Guilherme M de Macedo Ricardo Gargano
Publish Date: 2017/02/21
Volume: 23, Issue: 3, Pages: 87-
PDF Link

Abstract

This investigation generated rovibrational energies and spectroscopic constants for systems of CCl4 with Ng Ng = He Ne Ar O2 D2O and ND3 from scattering experimental data and the results presented are of interest for microwave spectroscopy studies of small halogenated molecules The rovibrational spectra were obtained through two different approaches Dunham and DVR within the improved Lennard Jones ILJ model Spectra were also generated within ordinary Lennard Jones and deviations suggest that the ILJ model should be preferred due to interactions beyond dispersion forces presented in these systems Data from the literature and additional high level quantum mechanical calculations presented in this work show that these systems should not be considered as van der Waals complexes due to halogen bonding HB interactions and this is especially true for the CCl4–D2O and CCl4–ND3 complexes The charge displacement from the latter systems are one order of magnitude higher than the values from literature for CCl4 and He Ne Ar and O2 systems and show significant deviations between DFT and HartreeFock values not previously reported in the literatureLGMM acknowledges CNPq Conselho Nacional de Desenvolvimento Científico e Tecnológico Brazilian Agency for his postdoctoral scholarship grant no 157843/20157 LGMM also thanks Prof Sergio Rampino Scuola Normale Superiore Pisa Italy for kindly sharing his program “Cubes” The authors thank FINATEC Fundação de Empreendimentos Científicos e Tecnológicos and FAPDF Fundação de Apoio à Pesquisa do Distrito Federal for financial support


Keywords:

References


.
Search In Abstract Of Papers:
Other Papers In This Journal:

  1. The X∙∙∙Au interactions in the CF 3 X (X = Cl, Br) ∙∙∙Au n ( n = 2, 3, and 4) complexes
  2. Structures and energies of the radicals and anions generated from chlorpyrifos
  3. Quantitative structure-activity relationship by CoMFA for cyclic urea and nonpeptide-cyclic cyanoguanidine derivatives on wild type and mutant HIV-1 protease
  4. The charge mobilities in fused ring Oligothiophenes and their derivatives: influence of molecular structures
  5. Computational design of a lipase for catalysis of the Diels-Alder reaction
  6. Evolutionary trace analysis of ionotropic glutamate receptor sequences and modeling the interactions of agonists with different NMDA receptor subunits
  7. Computational quest for spherical C 12 B 68 fullerenes with “ magic ” π-electrons and quasi-planar tetra-coordinated carbon
  8. The interaction strengths and spectroscopy parameters of the C 2 H 2 ∙∙∙HX and HCN∙∙∙HX complexes (X = F, Cl, CN, and CCH) and related ternary systems valued by fluxes of charge densities: QTAIM, CCFO, and NBO calculations
  9. Structure and properties of alizarin complex formed with alkali metal hydroxides in methanol solution
  10. Relationships between aqueous acidities and computed surface-electrostatic potentials and local ionization energies of substituted phenols and benzoic acids
  11. The simulation of UV spectroscopy and electronic analysis of temozolomide and dacarbazine chemical decomposition to their metabolites
  12. Homology modeling, substrate docking, and molecular simulation studies of mycobacteriophage Che12 lysin A
  13. Cellular interaction through LewisX cluster: theoretical studies
  14. DFT tests for group 8 transition metal carbonyl complexes
  15. Combinatorially-generated library of 6-fluoroquinolone analogs as potential novel antitubercular agents: a chemometric and molecular modeling assessment
  16. Electronic, magnetic and optical properties of Cu, Ag, Au-doped Si clusters
  17. Structural and functional characterization of AtPTR3, a stress-induced peptide transporter of Arabidopsis
  18. Optical chemosensors for Cu(II) ion based on BODIPY derivatives: an experimental and theoretical study
  19. Novel insights into the structural requirements for the design of selective and specific aldose reductase inhibitors
  20. Atomistic simulations of materials for optical chemical sensors: DFT-D calculations of molecular interactions between gas-phase analyte molecules and simple substrate models
  21. A theoretical investigation of the energetics and spectroscopic properties of the gas-phase linear proton-bound cation–molecule complexes, XCH + –N 2 (X = O, S)
  22. Computational study of graphene growth on copper by first-principles and kinetic Monte Carlo calculations
  23. Evaluation of active designs of cephalosporin C acylase by molecular dynamics simulation and molecular docking
  24. Comparison of the structural characteristics of Cu 2+ -bound and unbound α-syn12 peptide obtained in simulations using different force fields
  25. Improving the hydrogen storage properties of metal-organic framework by functionalization
  26. Mixtures of amino-acid based ionic liquids and water
  27. SWIFT MODELLER : A JAVA based GUI for molecular modeling
  28. Theoretical studies of the interaction between enflurane and water
  29. CNXeCl and CNXeBr species as halogen bond donors: a quantum chemical study on the structure, properties, and nature of halogen···nitrogen interactions
  30. Insights from comprehensive multiple receptor docking to HDAC8
  31. Molecular docking and molecular dynamics studies reveal structural basis of inhibition and selectivity of inhibitors EGCG and OSU-03012 toward glucose regulated protein-78 (GRP78) overexpressed in glioblastoma
  32. Computational investigation of stoichiometric effects, binding site heterogeneities, and selectivities of molecularly imprinted polymers
  33. Mechanism of OH-initiated atmospheric oxidation of E/Z-CF 3 CF = CFCF 3 : a quantum mechanical study
  34. Periodic density functional theory study of the high-pressure behavior of crystalline l -serine- l -ascorbic acid
  35. A model for the shuttle motions of puerarin and daidzin inside the cavity of β-cyclodextrin in aqueous acetic acid: insights from molecular dynamics simulations
  36. Mechanistic aspects of superacid mediated condensation of polyphenols with ketones. Implications for polymer synthesis
  37. Symmetric nested complexes of fullerenes
  38. A density functional study towards substituent effects on anion sensing with urea receptors
  39. An Insilico approach to High Altitude Pulmonary Edema - Molecular modeling of human β 2 adrenergic receptor and its interaction with Salmeterol & Nifedipine
  40. A comparative study of semi-squaraine and squaraine dyes using computational techniques: tuning the charge transfer/biradicaloid character by substitution
  41. The reaction mechanisms and kinetics of CF 3 CHFOCH 3 and CHF 2 CHFOCF 3 with atomic chlorine: a computational study
  42. Theoretical study of CO oxidation on cationic, neutral, and anionic AuM dimers (M = Pd and Ag)
  43. In silico investigations of possible routes of assembly of ORF 3a from SARS-CoV
  44. Some molecular/crystalline factors that affect the sensitivities of energetic materials: molecular surface electrostatic potentials, lattice free space and maximum heat of detonation per unit volume
  45. Substitution, cooperative, and solvent effects on π pnicogen bonds in the FH 2 P and FH 2 As complexes
  46. Molecular crystals: the crystal field effect on molecular electronic structure
  47. Binuclear rhenium carbonyl nitrosyls related to dicobalt octacarbonyl and their decarbonylation products
  48. Evolution of the hydrogen-bonding motif in the melamine–cyanuric acid co-crystal: a topological study
  49. Structure-based characterization of the binding of peptide to the human endophilin-1 Src homology 3 domain using position-dependent noncovalent potential analysis
  50. Modeling of adsorption in nanopores
  51. A density functional theory study of hydrocarbon combustion and synthesis on Ni surfaces
  52. Catalytic mechanisms of Au 11 and Au 11-n Pt n ( n =1–2) clusters: a DFT investigation on the oxidation of CO by O 2
  53. Molecular modeling studies of poly lactic acid initiation mechanisms
  54. Dynamics of DNA polymerase I (Klenow fragment) under external force
  55. Comparative molecular field analysis and molecular dynamics studies of α/β hydrolase domain containing 6 (ABHD6) inhibitors
  56. Dyotropic rearrangement of bridgehead substituents in closed dithienylethenes; conjugated verses non-conjugated analogues
  57. A rational reduction of CI expansions: combining localized molecular orbitals and selected charge excitations
  58. A DFT investigation of conformational geometries and interconversion equilibria of phenylthiosemicarbazone and its complexation with zinc
  59. Molecular modeling of the GABA C receptor ligand-binding domain
  60. Photophysical properties of copper(I) complexes containing pyrazine-fused phenanthroline ligands: a joint experimental and theoretical investigation
  61. A QM-MD simulation approach to the analysis of FRET processes in (bio)molecular systems. A case study: complexes of E. coli purine nucleoside phosphorylase and its mutants with formycin A
  62. New pockets in dengue virus 2 surface identified by molecular dynamics simulation
  63. Study on the anisotropic response of condensed-phase RDX under repeated stress wave loading via ReaxFF molecular dynamics simulation
  64. Mechanism of extractive/oxidative desulfurization using the ionic liquid inimidazole acetate: a computational study
  65. Regression formulae for ab initio and density functional calculated chemical shifts
  66. Structural insights into human GPCR protein OA1: a computational perspective
  67. Performance of four different force fields for simulations of dipeptide conformations: GlyGly, GlyGly − , GlyGly · Cl − , GlyGly · Na + and GlyGly · (H 2 O) 2
  68. Electronic, ductile, phase transition and mechanical properties of Lu-monopnictides under high pressures

Search Result: