Paper Search Console

Home Search Page About Contact

Journal Title

Title of Journal: Euphytica

Search In Journal Title:

Abbravation: Euphytica

Search In Journal Abbravation:

Publisher

Springer Netherlands

Search In Publisher:

DOI

10.1002/chin.201217050

Search In DOI:

ISSN

1573-5060

Search In ISSN:
Search In Title Of Papers:

Implementation of simple sequence repeat markers t

Authors: Asha M Brunings Catalina Moyer Natalia Peres Kevin M Folta
Publish Date: 2010/01/12
Volume: 173, Issue: 1, Pages: 63-75
PDF Link

Abstract

Simple sequence repeats SSRs or microsatellites are frequently used as a robust rapid and relatively inexpensive means of genotyping Recent reports in cultivated strawberry Fragaria × ananassa have identified a widely applicable set of SSRs that permits discrimination of closelyrelated genotypes In the present study this same set of SSRs is analyzed in cultivars commonly grown in the state of Florida as well as advanced breeding selections from the University of Florida program Nine primer pairs have been used to produce discrete SSR patterns for all lines tested including diagnostic sets that distinguish between closelyrelated cultivars and/or breeding selections A comparison of markers to known pedigrees is presented along with analysis of relative relatedness between lines studied We also detail important technical considerations for transferability and limitations of these technologies between laboratories The resulting genotype data for cultivars commonly used in Florida are accessible as supplemental data in graphic format and allow comparison with other cultivars Users can thus select the most diagnostic SSRs to test the lines in question These resources provide new tools for breeders and nurseries to authenticate genotypes follow inheritance patterns and enforce patent protection As important this report underscores the strengths and weaknesses of applying the original methodologies to a different plant population in independent laboratoriesThis research was funded by a grant from the University of Florida IFAS Dean for Research KMF and NP The authors thank Dr Daniel Sargent for valuable discussions and Kayla Shea Childers for technical assistance The authors also recognize Dr Craig K Chandler for helpful insights and starting materials

Keywords:

References

.
Search In Abstract Of Papers:
Other Papers In This Journal:
  1. A genetic map of an interspecific diploid pseudo testcross population of coffee
  2. SNP genotyping and characterization of pistil traits revealing a distinct phylogenetic relationship among the species of Oryza
  3. Estimation of genetic parameters and gains for color traits of strawberry
  4. Molecular cytogenetic characterization of wheat- Thinopyrum ponticum translocations bearing blue-grained gene(s) induced by r -ray
  5. Interspecific cross of Brassica oleracea var. alboglabra and B. napus : effects of growth condition and silique age on the efficiency of hybrid production, and inheritance of erucic acid in the self-pollinated backcross generation
  6. Comparison of shifted multiplicative model, rank correlation, and biplot analysis for clustering winter wheat production environments
  7. Mapping QTL for seed yield and canning quality following processing of black bean ( Phaseolus vulgaris L.)
  8. In vitro-induced tetraploids of Plectranthus esculentus are nematode-tolerant and have enhanced nutritional value
  9. Introgression of bacterial blight resistance genes Xa7 , Xa21 , Xa22 and Xa23 into hybrid rice restorer lines by molecular marker-assisted selection
  10. Cytological and molecular characterization of wheat- Hordeum chilense chromosome 7H ch introgression lines
  11. Cytological and molecular characterization of wheat- Hordeum chilense chromosome 7H ch introgression lines
  12. Combining ability for yield and fibre characteristics in Tanzanian cotton germplasm
  13. Pattern analysis on grain yield performance of Chinese and CIMMYT spring wheat cultivars sown in China and CIMMYT
  14. Semi-dominant genes confer additive tolerance to metribuzin in narrow-leafed lupin ( Lupinus angustifolius L.) mutants
  15. Genetic mapping of resistance to Diuraphis noxia (Kurdjumov) biotype 2 in wheat ( Triticum aestivum L.) accession CI2401
  16. Genetic diversity of wheat–rye 1BL.1RS translocation lines derived from different wheat and rye sources
  17. Geographical differentiation and diallel analysis of seed dormancy in barley
  18. Development of molecular markers linked to barley heterosis
  19. Seed dormancy QTL identification across a Sorghum bicolor segregating population
  20. Broadening the genetic base of sugar beet: introgression from wild relatives
  21. Simple Sequence Repeat Markers for Detecting Sources of Tolerance to PTSL Syndrome in Prunus Persica Rootstocks
  22. Evaluation of rhizomania-resistance segregating sequences and overall genetic diversity pattern among selected accessions of Beta and Patellifolia . Potential implications of breeding for genetic bottlenecks in terms of rhizomania resistance
  23. Genetic Variability for Mineral Concentration in the Forage of Jerusalem Artichoke Cultivars
  24. Quantitative trait loci for phytate in rice grain and their relationship with grain micronutrient content
  25. Combining ability of popcorn lines for seed quality and agronomic traits
  26. Genotype × environment interactions in populations possessing Ga1 - s and ga1 alleles for cross incompatibility in maize
  27. Quantitative trait loci for resistance to Fusarium head blight in the Chinese wheat landrace Huangfangzhu
  28. Effects of reduced height ( Rht ) and photoperiod insensitivity ( Ppd ) alleles on yield of wheat in contrasting production systems
  29. Morphological and molecular characterization of local varieties, modern cultivars and wild relatives of an emerging vegetable crop, the pepino ( Solanum muricatum ), provides insight into its diversity, relationships and breeding history
  30. Evaluation of variability in argan oil content through different environments and preselection of elite genotypes
  31. The inheritance model for the fiberless trait in upland cotton ( Gossypium hirsutum L.) line SL1-7-1: variation on a theme
  32. Stability of genome-wide QTL effects on malt α-amylase activity in a barley doubled-haploid population
  33. STS markers for powdery mildew resistance gene Pm6 in wheat
  34. Construction of a high-density SSR marker-based linkage map of zoysiagrass ( Zoysia japonica Steud.)
  35. Understanding the genetic control of lodging-associated plant characters in winter wheat ( Triticum aestivum L.)
  36. Contribution of autochthonous maize populations for adaptation to European conditions
  37. Genome wide association mapping of agro-morphological and disease resistance traits in sugarcane
  38. Modification of sugar profiles in California adapted apricots ( Prunus armeniaca L.) through breeding with Central Asian germplasm
  39. Meiotic nondisjunction in resynthesized Brassica napus and generation of aneuploids through microspore culture and their characterization
  40. Agronomic diversity of naked barley ( Hordeum vulgare L.): a potential resource for breeding new food barley for Europe
  41. Effect of added barley chromosomes on the flowering time of new wheat/winter barley addition lines in various environments
  42. Differential gene transcript accumulation in peas in response to powdery mildew ( Erysiphe pisi ) attack
  43. Role of Berberis spp. as alternate hosts in generating new races of Puccinia graminis and P. striiformis
  44. Gamete selection for improving physiological resistance to white mold in common bean
  45. Validation of the two-gene epistatic model for vernalization response in a winter × spring barley cross
  46. Characterization, diversity, and relationships of the Spanish striped ( Listada ) eggplants: a model for the enhancement and protection of local heirlooms
  47. Genetic variation for big-vein symptom expression and resistance to Mirafiori lettuce big-vein virus in Lactuca virosa L., a wild relative of cultivated lettuce
  48. Molecular detection of rye ( Secale cereale L . ) chromatin in wheat line 07jian126 ( Triticum aestivum L . ) and its association to wheat powdery mildew resistance
  49. Comparison of yield based drought tolerance indices in improved varieties, genetic stocks and landraces of potato ( Solanum tuberosum L.)
  50. Relationship between kernel drydown rate and resistance to gibberella ear rot in maize
  51. A heuristic method of searching for interesting markers in terms of quantitative traits
  52. Molecular characterization of Pina and Pinb allelic variations in Xinjiang landraces and commercial wheat cultivars
  53. Wheat transformation – an update of recent progress
  54. Breeding for salinity resistance in mulberry ( Morus spp.)
  55. Genetic diversity of European spelt wheat ( Triticum aestivum ssp. spelta L. em. Thell.) revealed by glutenin subunit variations at the Glu-1 and Glu-3 loci
Search Result: