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Title of Journal: Extremophiles

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Abbravation: Extremophiles

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Springer-Verlag

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DOI

10.1016/0304-419x(95)00009-5

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1433-4909

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The genome of BCJA1c a bacteriophage active again

Authors: Andrew M Kropinski Melissa Hayward M Dorothy Agnew Ken F Jarrell
Publish Date: 2004/11/17
Volume: 9, Issue: 2, Pages: 99-109
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Abstract

The sequence of the genome of the first alkaliphilic bacteriophage has been determined Temperate phage BCJA1 possesses a terminally redundant genome of approximately 41 kb with a mol G+C content of 417 and 59 genes arranged predominantly into two divergent transcriptons The integrase gene of this phage is unique in that it contains a ribosomal slippage site While this type of translational regulation occurs in the synthesis of transposase this is the first time that it has been observed in a bacteriophage integrase The DNA replication recombination packaging and morphogenesis proteins show their greatest sequence similarity to phages and prophages from the genus Streptococcus Host specificity lysin and lysogeny maintenance functions are most closely related to genes from Bacillus species

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  1. Bio-removal of cadmium by growing deep-sea bacterium Pseudoalteromonas sp. SCSE709-6
  2. Unmarked gene deletion and host–vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicus
  3. The amino acid composition of proteins from anaerobic halophilic bacteria of the order Halanaerobiales
  4. Characterization of a cold-adapted and salt-tolerant exo-chitinase (ChiC) from Pseudoalteromonas sp. DL-6
  5. Structural and functional characterization of aspartate racemase from the acidothermophilic archaeon Picrophilus torridus
  6. Novel ultramicrobacterial isolates from a deep Greenland ice core represent a proposed new species, Chryseobacterium greenlandense sp. nov.
  7. Isolation of an extremely halophilic arhaeon Natrialba sp. C21 able to degrade aromatic compounds and to produce stable biosurfactant at high salinity
  8. Characterization of two β-decarboxylating dehydrogenases from Sulfolobus acidocaldarius
  9. Thermophilic and halophilic β-agarase from a halophilic archaeon Halococcus sp. 197A
  10. The hydroxyectoine gene cluster of the non-halophilic acidophile Acidiphilium cryptum
  11. Comparison of bacterial diversity in proglacial soil from Kafni Glacier, Himalayan Mountain ranges, India, with the bacterial diversity of other glaciers in the world
  12. Archaeal diversity: temporal variation in the arsenic-rich creek sediments of Carnoulès Mine, France
  13. Overexpression and characterization of thermostable serine protease in Escherichia coli encoded by the ORF TTE0824 from Thermoanaerobacter tengcongensis
  14. Knockout and functional analysis of two DExD/H-box family helicase genes in Sulfolobus islandicus REY15A
  15. Conserved residues in membrane-bound acid pyrophosphatase from Sulfolobus tokodaii , a thermoacidophilic archaeon
  16. Microbial diversity and methanogenic potential in a high temperature natural gas field in Japan
  17. Effect of temperature on growth parameters of psychrophilic bacteria and yeasts
  18. Identification of replication origins in the genome of the methanogenic archaeon, Methanocaldococcus jannaschii
  19. Gene and primary structures of dye-linked l -proline dehydrogenase from the hyperthermophilic archaeon Thermococcus profundus show the presence of a novel heterotetrameric amino acid dehydrogenase complex
  20. Gene and primary structures of dye-linked l -proline dehydrogenase from the hyperthermophilic archaeon Thermococcus profundus show the presence of a novel heterotetrameric amino acid dehydrogenase complex
  21. Changes in prokaryotic community composition accompanying a pronounced temperature shift of a shallow marine thermal brine pool (Panarea Island, Italy)
  22. Characterization of Microaerobacter geothermalis gen. nov., sp. nov., a novel microaerophilic, nitrate- and nitrite-reducing thermophilic bacterium isolated from a terrestrial hot spring in Tunisia
  23. Identification of iron-reducing Thermus strains as Thermus scotoductus
  24. Acidithiobacillus ferrivorans SS3 presents little RNA transcript response related to cold stress during growth at 8 °C suggesting it is a eurypsychrophile
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