Paper Search Console

Home Search Page About Contact

Journal Title

Title of Journal: Hydrobiologia

Search In Journal Title:

Abbravation: Hydrobiologia

Search In Journal Abbravation:

Publisher

Springer Netherlands

Search In Publisher:

DOI

10.1007/bf00406529

Search In DOI:

ISSN

1573-5117

Search In ISSN:
Search In Title Of Papers:

Comparative analysis of nuclear ribosomal DNA from

Authors: JangSeu Ki IlChan Kim JaeSeong Lee
Publish Date: 2008/10/21
Volume: 616, Issue: 1, Pages: 229-239
PDF Link

Abstract

Nuclear ribosomal DNAs rDNA constitute a multigene family with tandemly arranged units linked by an intergenic spacer IGS Here we present the complete DNA sequence 7731 bp of a single repeat unit of an rDNA sequence from the moon jelly Aurelia sp1 Cnidaria Scypozoa The tandemly repeated rDNA units consisted of coding and noncoding regions whose arrangement was 18S rDNA 1814 bp 462 of GC contentinternal transcribed spacer 1 ITS1 272 bp 39758S rDNA 158 bp 507ITS2 278 bp 51428S rDNA 3606 bp 497IGS 1603 bp 456 GC composition in the single unit of rDNA was 478 None of the 5S rDNA was found in the repeat units Putative structures of a termination transcription signal polyT tract and promoterlike birepeats within the noncoding region were also identified A block of minisatellites with five repeats was detected within the IGS Comparative analyses of parsimony and dot plots showed that the IGS was highly informative The sequence revealed here was the first completion of rDNA from the phylum Cnidaria using as a model of rDNA for making molecular comparisons of jellyfish membersWe would like to thank Drs Sheikh Raisuddin and HansUwe Dahms for English editing on the manuscript We are very grateful to Dr Timothy J Page and two anonymous reviewers for reading and critical comments This work was supported by grants of KOSEF NRL 2006 and ETEP 2006 funded to JaeSeong Lee and by a grant of KOSEF 2007 funded to Heum Gi Park Thus work was also supported by a grant from Korea Polar Research Institute PE08050 funded to IlChan Kim

Keywords:

References

.
Search In Abstract Of Papers:
Other Papers In This Journal:
  1. Using a phylogeographic approach to investigate the diversity and determine the distributional range of an isopod (Crustacea: Peracarida), Stenosoma nadejda (Rezig, 1989) in the Atlantic-Mediterranean region
  2. The effects of top-down and bottom-up controls on macroinvertebrate assemblages in headwater streams
  3. The influence of Ceratophyllum demersum L. and Stratiotes aloides L. on richness and diversity of aquatic vegetation in the lakes of mid-eastern Poland
  4. Phosphorus fractions and alkaline phosphatase activity in sediments of a large eutrophic Chinese lake (Lake Taihu)
  5. Interactions between nutrient availability and climatic fluctuations as determinants of the long-term phytoplankton community changes in Lake Garda, Northern Italy
  6. Importance of underwater light field in selecting phytoplankton morphology in a eutrophic reservoir
  7. Distribution and Abundance of Fauna on Living Tissues of Two Brazilian Hermatypic Corals ( Mussismilia hispida (Verril 1902) and Siderastrea stellata Verril, 1868)
  8. Dynamics of microbial planktonic food web components during a river flash flood in a Mediterranean coastal lagoon
  9. Chironomid species are sensitive to sugarcane cultivation
  10. Dormancy and dispersal as mediators of zooplankton population and community dynamics along a hydrological disturbance gradient in inland temporary pools
  11. Drift of stream invertebrates below a cave source
  12. Absence of negative allelopathic effects of cylindrospermopsin and microcystin-LR on selected marine and freshwater phytoplankton species
  13. Biogeochemical modelling of Ria Formosa (South Portugal)
  14. Global biodiversity of Scorpionflies and Hangingflies (Mecoptera) in freshwater
  15. Global biodiversity of Scorpionflies and Hangingflies (Mecoptera) in freshwater
  16. Characteristics of the pelagic phytoplankton in shallow oxbows
  17. Characterization of the waterbird communities wintering in Tunisian coastal lagoons
  18. Cultivating the climate: socio-economic prospects and consequences of climate-friendly peat land management in Germany
  19. Diurnal variation of phytoplankton in Loch Lomond
  20. Changes in microphytobenthos fluorescence over a tidal cycle: implications for sampling designs
  21. The fuzzy index of ecosystem integrity (FINE): a new index of environmental integrity for transitional ecosystems
  22. A fully implantable multi-channel biotelemetry system for measurement of blood flow and temperature: a first evaluation in the green sturgeon
  23. Are prokaryotic cell shape and size suitable to ecosystem characterization?
  24. Global diversity of hymenopterans (Hymenoptera; Insecta) in freshwater
  25. Natural and domestic introgressions in the marble trout population of Soča River (Slovenia)
  26. Phytoplankton composition and periodicity in a northeastern Quebec lake
  27. Distribution of freshwater diatom Didymosphenia geminata in streams in the Sierra Nevada, USA, in relation to water chemistry and bedrock geology
  28. Present state of the systematics of planktonic coccoid green algae of inland waters
  29. Alteration of essential fatty acids in secondary consumers across a gradient of cyanobacteria
  30. Experimental isolation of positively and negatively phototactic phenotypes from a natural population of Daphnia magna Strauss: A contribution to the genetics of vertical migration
  31. Short-term effects of nutrient enrichment on river biofilm: N–NO 3 − uptake rate and response of meiofauna
  32. The effect of environmental factors on circulation and respiration in teleost fish
  33. Dissolved oxygen concentration and diversity of benthic macroinvertebrates in an artificially destratified lake
  34. Chlorella thermophila (Trebouxiophyceae, Chlorophyta), a novel thermo-tolerant Chlorella species isolated from an occupied rooftop incubator
  35. Chlorella thermophila (Trebouxiophyceae, Chlorophyta), a novel thermo-tolerant Chlorella species isolated from an occupied rooftop incubator
  36. Surfacing activity and food utilisation in the obligatory air-breathing fish ophiocephalus striatus as a function of body weight
  37. Edge effect: a catalyst of spatial heterogeneity in natural biofilms
  38. The faunal role in the degradation of the common intertidal salt marsh plant Scirpus maritimus
  39. Length–mass relationships for lake macroinvertebrates corrected for back-transformation and preservation effects
  40. The taxonomic and ecological status of the environmentally restricted Spongillid species of North America. II. Anheteromeyenia biceps (Lindenschmidt, 1950)
  41. Moulting and colour changes in the Prawn, Caridina weberi
  42. Effects of freshwater input on nutrient loading, phytoplankton biomass, and cyanotoxin production in an oligohaline estuarine lake
  43. Proteomic and gene expression differences between post-diapause and subitaneous offspring phenotypes in the cyclic parthenogen Daphnia pulex
  44. Long term changes in the benthic communities of Loch Linnhe and Loch Eil (Scotland)
  45. The cyclopoid copepods of a wet campo marsh in central Brazil
  46. Propagule predation in a Neotropical mangrove: the role of the Grapsid crab Goniopsis cruentata
  47. Ecomorphological adaptation in three mudskippers (Teleostei: Gobioidei: Gobiidae) from the Persian Gulf and the Gulf of Oman
  48. Effects of thermal regime on mayfly assemblages in mountain streams
  49. Production and energy flow in the benthic community of a Texas pond
  50. Epiphytic protozoans on reed rootlets from Dutch waters
  51. Environmental filtering determines community patterns in temporary wetlands: a multi-taxon approach
  52. Ecological status assessment of European lakes: a comparison of metrics for phytoplankton, macrophytes, benthic invertebrates and fish
  53. Retention of radionuclides by some aquatic fresh water plants
  54. Contributions to the rotifer fauna of West Bengal. II genus Lepadella bory de St. Vincent, 1826
  55. Light-dependent fluorescence in the coral Galaxea fascicularis
  56. Die eintagsfliegen ( Ephemeropta ) in forellenbächen der beskiden. II. — Produktion
  57. High cryptic diversity and persistent lineage segregation in endemic Romecytheridea (Crustacea, Ostracoda) from the ancient Lake Tanganyika (East Africa)
  58. Assessing the sensitivity of alpine lakes and ponds to nitrogen deposition in the Canadian Rocky Mountains
  59. Nitrogen retention by peatland buffer areas at six forested catchments in southern and central Finland
  60. The effects of sewage-treatment-works effluent on epilithic bacterial and algal communities of three streams in northern england
  61. Diatom evidence for the timing and causes of eutrophication in Lake Victoria, East Africa
  62. Rapid estimation of potential yield for data-poor Tapes philippinarum fisheries in North Adriatic coastal lagoons
  63. Genetic population structure of the Fire-bellied toad Bombina bombina in an area of high population density: implications for conservation
  64. Lack of lake augmentation effects on aquatic macrophyte abundance and distribution in west-central Florida lakes, USA
  65. Seasonal dynamics of phytoplankton in the Gulf of Aqaba, Red Sea
  66. Contaminants in the Upper Mississippi River: historic trends, responses to regulatory controls, and emerging concerns
  67. Changes in fish species composition in Lake Naivasha, Kenya
  68. Effects of a rapidly increasing population of common carp on vegetative cover and waterfowl in a recently restored Midwestern shallow lake
  69. Food quantity shapes life history and survival strategies in Daphnia magna (Cladocera)
  70. Assessing recent climatic and human influences on chironomid communities from two moderately impacted lakes in western Ireland
  71. Macroinvertebrate cycles of decline and recovery in Swan Coastal Plain (Western Australia) wetlands affected by drought-induced acidification
  72. Discerning patterns of diversity from biogeographical distributions: testing models of metacommunity dynamics using non-marine ostracodes from San Salvador Island, Bahamas
  73. Preliminary observations on Gibbula umbilicalis (da Costa, 1778) on the Portuguese coast
  74. Global diversity of crabs (Crustacea: Decapoda: Brachyura) in freshwater
  75. Seasonal variation in primary productivity in three tropical ponds
  76. Phylogeny of the genus Hesperodiaptomus (Copepoda) based on nucleotide sequence data of the nuclear ribosomal gene
  77. Homogenization dynamics of the fish assemblages in Neotropical reservoirs: comparing the roles of introduced species and their vectors
  78. Effects of nitrogen concentration on the taxonomic and functional structure of phytoplankton communities in the Western Baltic Sea and implications for the European water framework directive
  79. Combining GIS and GAMs to identify potential habitats of squid Loligo vulgaris in the Northwestern Mediterranean
  80. Planktonic cnidarian distribution and feeding of Pelagia noctiluca in the NW Mediterranean Sea
  81. Reproductive patterns and secondary production of Gammaropsis japonicus (Crustacea, Amphipoda) on the seagrass Zostera marina of Korea
  82. Changes in benthic macroinvertebrate abundance and lake isotope (C, N) signals following biomanipulation: an 18-year study in shallow Lake Vaeng, Denmark
  83. Reproductive ecology of the glacier lanternfish Benthosema glaciale
  84. Primary production of a seagrass bed on Kavaratti Atoll (Laccadives)
  85. Relationships between hydroperiod length, and seasonal and spatial patterns of beta-diversity of the microcrustacean assemblages in Mediterranean ponds
  86. Extensive analysis of nuclear cistron rDNA sequence of Paracyclopina nana (Cyclopoida: Cyclopettidae)
  87. No effect of recent sympatry with invasive zebra mussel on the oviposition decisions and reproductive success of the bitterling fish, a brood parasite of unionid mussels
  88. Cyanobacterial community and microcystin production in a recreational reservoir with constant Microcystis blooms
  89. Weak altitudinal pattern of overall chironomid richness is a result of contrasting trends of subfamilies in high-altitude ponds
  90. Combination of multiple biological quality elements into waterbody assessment of surface waters
  91. When fear kicks in: predator cues initially do not but eventually do affect insect distribution patterns in a new artificial pond cluster
  92. Population connectivity and genetic structure of burbot ( Lota lota ) populations in the Wind River Basin, Wyoming
  93. Just add water: sources of chironomid drift in a large river floodplain
  94. Changes in the water level of Lake Peipsi and their reflection in a sediment core
  95. A food web analysis of the Río de la Plata estuary and adjacent shelf ecosystem: trophic structure, biomass flows, and the role of fisheries
  96. Fish community assemblages changed but biomass remained similar after lake restoration by biomanipulation in a Chinese tropical eutrophic lake
  97. Biological barriers to restoration: testing the biotic resistance hypothesis in an upland stream recovering from acidification
  98. Resting-egg hatching and early population development in rotifers: a review and a hypothesis for differences between shallow and deep waters
  99. Alien cyanobacteria: an unsolved part of the “expansion and evolution” jigsaw puzzle?
  100. The importance of nutrient source in determining the influence of retention time on phytoplankton: an explorative modelling study of a naturally well-flushed lake
  101. Influence of aperiodic summer droughts on leaf litter breakdown and macroinvertebrate assemblages: testing the drying memory in a Central Apennines River (Aterno River, Italy)
  102. Measurement of rates of grazing of the ostracod Cyprinotus carolinensis on blue-green algae
  103. Waterbird response indicates floodplain wetland restoration
  104. Population dynamics of Aurelia sp.1 ephyrae and medusae in Jiaozhou Bay, China
  105. Population dynamics of Aurelia sp.1 ephyrae and medusae in Jiaozhou Bay, China
  106. Chemisty of lake water and groundwater in areas of contrasting glacial drifts in Eastern Minnesota
  107. The delayed effects of meteorological changes on the water frogs in Central Italy
  108. Changes in fossil chironomid remains along a depth gradient: evidence for common faunal thresholds within lakes
Search Result: