Journal Title
Title of Journal: Antonie van Leeuwenhoek
|
Abbravation: Antonie van Leeuwenhoek
|
Publisher
Springer Netherlands
|
|
|
|
|
|
Authors: MiHwa Lee JungHoon Yoon
Publish Date: 2012/06/02
Volume: 102, Issue: 4, Pages: 591-599
Abstract
A Gramnegative facultatively anaerobic nonmotile and rodshaped bacterial strain designated SMK112T was isolated from a tidal flat sediment on the western coast of Korea Phylogenetic analyses based on 16S rRNA and gyrB gene sequences showed that strain SMK112T belonged to the genus Shewanella clustering with the type strain of Shewanella amazonensis Strain SMK112T exhibited the highest 16S rRNA gene sequence similarity value 970 and the highest gyrB sequence similarity value 878 to S amazonensis SB2BT respectively Strain SMK112T contained simultaneously both menaquinones and ubiquinones the predominant menaquinone was MK7 and the predominant ubiquinones were Q7 and Q8 The major fatty acids 10 of the total fatty acids detected in strain SMK112T were the MIDI system summed feature 3 isoC150 2OH and/or C161 ω7c isoC150 C171 ω8c and C160 The DNA G+C content of strain SMK112T was 580 mol and its mean DNA–DNA relatedness value with S amazonensis ATCC 700329T was 15 ± 46 Differential phenotypic properties together with the phylogenetic and genetic distinctiveness revealed that strain SMK112T is distinguishable from recognized Shewanella species On the basis of the data presented strain SMK112T is considered to represent a novel Shewanella species for which the name Shewanella litorisediminis sp nov is proposed The type strain is SMK112T =KCTC 23961T = CCUG 62411TThis work was supported by the Program for Collection of Domestic Biological Resources from the National Institute of Biological Resources NIBR and BK 21 program from the Ministry of Education Science and Technology MEST of the Republic of Korea
Keywords:
.
|
Other Papers In This Journal:
- Differentiation of Streptomyces strains by gas chromatography
- Absence of induced resistance in Agaricus bisporus against Lecanicillium fungicola
- Cell biology of unique anammox bacteria that contain an energy conserving prokaryotic organelle
- Roseomonas musae sp. nov., a new bacterium isolated from a banana phyllosphere
- Lcc1 and Lcc5 are the main laccases secreted in liquid cultures of Coprinopsis cinerea strains
- Production of biosurfactants and antibiotics by fluorescent pseudomonads isolated from a closed hydroponic system equipped with a slow filter
- Lampropedia puyangensis sp. nov., isolated from symptomatic bark of Populus × euramericana canker and emended description of Lampropedia hyalina (Ehrenberg 1832) Lee et al. 2004
- The ABC-transporter AtmA is involved in nickel and cobalt resistance of Cupriavidus metallidurans strain CH34
- Bacillus depressus sp. nov., isolated from soil of a sunflower field
- Epilithic biofilms in Saint Callixtus Catacombs (Rome) harbour a broad spectrum of Acidobacteria
- Aliiglaciecola coringensis sp. nov., isolated from a water sample collected from mangrove forest in Coringa, Andhra Pradesh, India
- Streptomyces tunisiensis sp. nov., a novel Streptomyces species with antibacterial activity
- Rare or rarely detected? Ceraceosorus guamensis sp. nov.: a second described species of Ceraceosorales and the potential for underdetection of rare lineages with common sampling techniques
- Biochemical characterization and sequence analysis of a xylanase produced by an exo-symbiotic bacterium of Gryllotalpa orientalis , Cellulosimicrobium sp. HY-12
- Kangiella chungangensis sp. nov. isolated from a marine sand
- Phylogenomic resolution of the bacterial genus Pantoea and its relationship with Erwinia and Tatumella
- Control of pyrimidine nucleotide formation in Pseudomonas fulva
- Sphingobacterium pakistanensis sp. nov., a novel plant growth promoting rhizobacteria isolated from rhizosphere of Vigna mungo
- A phylogenomic and molecular marker based proposal for the division of the genus Borrelia into two genera: the emended genus Borrelia containing only the members of the relapsing fever Borrelia , and the genus Borreliella gen. nov. containing the members of the Lyme disease Borrelia ( Borrelia burgdorferi sensu lato complex)
- Erratum to: Description of Citricoccus nitrophenolicus sp. nov., a para -nitrophenol degrading actinobacterium isolated from a wastewater treatment plant and emended description of the genus Citricoccus Altenburger et al. 2002
- Bacillus sediminis sp. nov., isolated from an electroactive biofilm
- Lipopeptides from Bacillus strain AR2 inhibits biofilm formation by Candida albicans
- Verminephrobacter aporrectodeae sp. nov. subsp. tuberculatae and subsp. caliginosae , the specific nephridial symbionts of the earthworms Aporrectodea tuberculata and A. caliginosa
- Alcoholic fermentation of carbon sources in biomass hydrolysates by Saccharomyces cerevisiae : current status
- Transcriptional activation of MerR family promoters in Cupriavidus metallidurans CH34
- Ruegeria arenilitoris sp. nov., isolated from the seashore sand around a seaweed farm
- Description of Kibdelosporangium banguiense sp. nov., a novel actinomycete isolated from soil of the forest of Pama, on the plateau of Bangui, Central African Republic
- Estimating changes of isotopic fractionation based on chemical kinetics and microbial dynamics during anaerobic methane oxidation: apparent zero- and first-order kinetics at high and low initial methane concentrations
- Debaryomyces psychrosporus sp. nov., a yeast species from a Venezuelan cave
- Photobacterium sanguinicancri sp. nov. isolated from marine animals
- Flagellin (FliC) protein sequence diversity among Bacillus thuringiensis does not correlate with H serotype diversity
- Effect of sulfide on growth physiology and gene expression of Desulfovibrio vulgaris Hildenborough
- Molecular diversity and transferability of the tetracycline resistance gene tet (M), carried on Tn 916-1545 family transposons, in enterococci from a total food chain
- Novosphingobium aquaticum sp. nov., isolated from lake water in Suwon, Republic of Korea
- The 1st EMBO workshop on PVC bacteria— Planctomycetes – Verrucomicrobia – Chlamydiae superphylum: Exceptions to the bacterial definition?
|