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Title of Journal: Plant Mol Biol Rep

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Abbravation: Plant Molecular Biology Reporter

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Springer-Verlag

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DOI

10.1002/sim.5538

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1572-9818

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Enhanced cloning efficiency of differential displa

Authors: Natasha M Sanabria Ian A Dubery
Publish Date: 2012/09/03
Volume: 22, Issue: 3, Pages: 309-309
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Abstract

Differential display offers a rapid and simultaneous comparison of expression profiles of mRNA from variant cells having the same genetic background An inherent flaw of the technique may yield falsepositives on subsequent analyses The only source of the band of interest is the denaturing sequencing gel from which the band is identified Consequently the integrity of the fragment is compromised and cloning required to gain sequence information becomes costly and timeconsuming Described herein are modifications used to stabilize the integrity of the fragment as well as to increase the number of transcripts cloned Additional steps were added to the processing of the differential display reverse transcriptionpolymerase chain reaction DDRTPCR fragment and cloning reactions were either adapted to concentrate the product or specifically optimized at certain points to prompt efficiency Therefore the overall cost and time spent analyzing truepositives as confirmed by reverse Northern blots was reduced


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Other Papers In This Journal:

  1. Genome-Wide Identification of microRNAs and Their Targets in Cold-Stored Potato Tubers by Deep Sequencing and Degradome Analysis
  2. An improved RNA isolation method for succulent plant species rich in polyphenols and polysaccharides
  3. Suppression Subtractive Hybridization Identified Differentially Expressed Genes in Pistil Mutations in Wheat
  4. Genome-wide Comparisons of Gene Expression for Yield Heterosis in Maize
  5. Genome-wide Comparisons of Gene Expression for Yield Heterosis in Maize
  6. Transcriptional Regulation of the Rice Phytase Gene OsPHY1 by Several Phytohormones and Osmotic Stresses Using Promoter-GUS Analysis
  7. Detection of single nucleotide mutations in wheat using single strand conformation polymorphism gels
  8. Wheat Neocentromeres Found in F1 Triticale × Tritordeum Hybrids (AABBRH ch ) After 5-Azacytidine Treatment
  9. BcJMJ30 , the Gene Encoding jmjC Domain-Containing Histone Demethylase Is Associated with Pollen Development and Fertilization in Brassica campestris ssp. chinensis
  10. Differential Protein Phosphorylation Regulates Chloroplast Movement in Response to Strong Light and Darkness in Arabidopsis thaliana
  11. Sulfite Oxidase is Essential for Timely Germination of Maize Seeds upon Sulfite Exposure
  12. Molecular Cloning, Biochemical Characterization, and Differential Expression of an Acetyl-CoA C-Acetyltransferase Gene ( AACT ) of Brahmi ( Bacopa monniera )
  13. Overexpression of the GmNAC2 Gene, an NAC Transcription Factor, Reduces Abiotic Stress Tolerance in Tobacco
  14. A pFBP6::Barnase Construct Resulted in Stigma and Style Ablation and Floral Abscission in Transgenic Tobacco
  15. Virus-Induced Gene Silencing of a Putative Glutathione S -Transferase Gene Compromised Ol-1 -Mediated Resistance against Powdery Mildew in Tomato
  16. Flow Karyotyping of Wheat Addition Line “T240” with a Haynaldia villosa 6VS Telosome
  17. Expression Analysis of Fatty Acid Biosynthetic Pathway Genes during Interactions of Oil Palm ( Elaeis guineensis Jacq.) with the Pathogenic Ganoderma boninense and Symbiotic Trichoderma harzianum Fungal Organisms
  18. Small RNA and Degradome Deep Sequencing Reveals Peanut MicroRNA Roles in Response to Pathogen Infection
  19. Isolation and amplification of DNA from rhizomes of turmeric and ginger
  20. A Quantitative Method to Monitor the Efficacy of Inhibitors Against the Chymotrypsin-Like Activity of the Proteasome in Tobacco Leaf Protoplasts
  21. Phylogenetic Analysis of S -Locus Genes Reveals the Complicated Evolution Relationship of S Haplotypes in Brassica
  22. QTL Mapping of Yield and Yield Components under Normal and Salt-stress Conditions in Bread Wheat ( Triticum aestivum L. )
  23. Expression Profile of Early Responsive Genes Under Salt Stress in Upland Cotton ( Gossypium hirsutum L.)
  24. A Novel Co-immunoprecipitation Protocol Based on Protoplast Transient Gene Expression for Studying Protein–protein Interactions in Rice
  25. Cloning and Expression Analysis of Wheat Pheophorbide a Oxygenase Gene TaPaO
  26. Expression of Aprotinin in Anther Causes Male Sterility in Tobacco var Petit havana
  27. Highly Conserved UFD1 Proteins Among Eukaryotes Exhibit Considerable C-Terminus Diversity in Different Taxa
  28. Isolation of cDNAs encoding for two distinct isoforms of the TATA-Box binding proteins from common bean ( Phaseolus vulgaris L.)

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