Paper Search Console

Home Search Page About Contact

Journal Title

Title of Journal: Mol Breeding

Search In Journal Title:

Abbravation: Molecular Breeding

Search In Journal Abbravation:

Publisher

Springer Netherlands

Search In Publisher:

DOI

10.1016/0148-9062(75)90479-9

Search In DOI:

ISSN

1572-9788

Search In ISSN:
Search In Title Of Papers:

Repetitive Indel Markers within the Emphasis Type

Authors: Harsh Raman Rosy Raman Rachel Wood Peter Martin
Publish Date: 2006/08/17
Volume: 18, Issue: 2, Pages: 171-183
PDF Link

Abstract

ALMT1 gene encoding a membrane protein that facilitates an aluminium stimulated malate efflux has been characterised and mapped in wheat Triticum aestivum L Here we have identified molecular markers targeting insertion/deletion indel and SSR repeats within intron 3 region of the ALMT1 gene Both the markers ALMT1SSR3a and ALMT1SSR3b based on repetitive indels exhibited complete cosegregation with Al tolerance malate efflux and a CAPS marker discriminating ALMT11 and ALMT12 alleles in a doubled haploid population derived from Diamondbird Altolerant/Janz Alsensitive A parental screen of 20 diverse wheat genotypes with repetitive indel markers indicated that six allele variants exist at the ALMT1SSR3 locus Sequence analysis confirmed that these variations were due to indels copy number of SSR repeats and base substitution within SSR repeats The higher level of variation in intron 3 suggests that this genomic region has been constrained by indels SSR and single nucleotide polymorphisms Results have proven that repetitive indel markers cosegregating with the Al tolerance locus will be useful for marker assisted selection and population and evolution studiesWe greatly acknowledge the NSW Agricultural Genomics Centre of BioFirst Initiative of NSW Government and NSWDPI for supporting this project We thank Fiona Wray for technical assistance and Greg Grimes Australian Winter Cereal Collection Tamworth for providing seeds of some wheat accessions

Keywords:

References

.
Search In Abstract Of Papers:
Other Papers In This Journal:
  1. Improvement of the recessive genic male sterile lines with a subgenomic background in Brassica napus by molecular marker-assisted selection
  2. Genetically engineered anthocyanin pathway for high health-promoting pigment production in eggplant
  3. High-resolution mapping and gene prediction of Xanthomonas Oryzae pv. Oryzae resistance gene Xa7
  4. Chromosome engineering in wheat to restore male fertility in the msH1 CMS system
  5. Marker imputation efficiency for genotyping-by-sequencing data in rice ( Oryza sativa ) and alfalfa ( Medicago sativa )
  6. In silico mapping of 1758 new SSR markers developed from public genomic sequences for sorghum
  7. Chromosome segregation in an allotetraploid banana hybrid (AAAB) suggests a translocation between the A and B genomes and results in eBSV-free offsprings
  8. Analysis of gene-derived SNP marker polymorphism in US wheat ( Triticum aestivum L.) cultivars
  9. Diversity arrays technology (DArT) markers in apple for genetic linkage maps
  10. Single nucleotide polymorphism in wheat chromosome region harboring Fhb1 for Fusarium head blight resistance
  11. Association mapping of stigma and spikelet characteristics in rice ( Oryza sativa L.)
  12. Marker-assisted breeding of Thai fragrance rice for semi-dwarf phenotype, submergence tolerance and disease resistance to rice blast and bacterial blight
  13. Genetic mapping of a putative Agropyron cristatum -derived powdery mildew resistance gene by a combination of bulked segregant analysis and single nucleotide polymorphism array
  14. High frequency of chromosome deletions in regenerated and mutagenized apple ( Malus ×  domestica Borkh.) seedlings
  15. Identification of glutinous maize landraces and inbred lines with altered transcription of waxy gene
  16. Fine mapping and identification of candidate Br - or gene controlling orange head of Chinese cabbage ( Brassica rapa L. ssp. pekinensis )
  17. Inheritance of seed coat color genes in Brassica napus (L.) and tagging the genes using SRAP, SCAR and SNP molecular markers
  18. A genotyping platform assembled with high-throughput DNA extraction, codominant functional markers, and automated CE system to accelerate marker-assisted improvement of rice
  19. Genome-wide association mapping for grain yield components and root traits in Brassica juncea (L.) Czern & Coss.
  20. Rapid method for detecting SNPs on agarose gels and its application in candidate gene mapping
  21. TILLING by Sequencing (TbyS) for targeted genome mutagenesis in crops
  22. A plant-transformation-competent BIBAC library of ginseng ( Panax ginseng C. A. Meyer) for functional genomics research and characterization of genes involved in ginsenoside biosynthesis
  23. Molecular mapping of powdery mildew resistance gene PmHNK in winter wheat ( Triticum aestivum L.) cultivar Zhoumai 22
  24. Enhanced tolerance of transgenic sweetpotato plants that express both CuZnSOD and APX in chloroplasts to methyl viologen-mediated oxidative stress and chilling
  25. Validation of DGAT1 - 2 polymorphisms associated with oil content and development of functional markers for molecular breeding of high-oil maize
  26. Ectopic overexpression of a mungbean vacuolar Na + /H + antiporter gene ( VrNHX1 ) leads to increased salinity stress tolerance in transgenic Vigna unguiculata L. Walp
  27. Fine mapping and molecular marker development of anthocyanin absent , a seedling morphological marker for the selection of male sterile 10 in tomato
  28. Transcriptome sequencing and de novo analysis of a recessive genic male sterile line in cabbage ( Brassica oleracea L. var. capitata)
  29. Quantitative trait loci for agronomic traits in an elite barley population for Mediterranean conditions
  30. Molecular characterization and detection of a spontaneous mutation conferring imidazolinone resistance in rapeseed and its application in hybrid rapeseed production
  31. Application of SSR markers for molecular characterization of hybrid parents and purity assessment of ICPH 2438 hybrid of pigeonpea [ Cajanus cajan (L.) Millspaugh]
  32. QTL mapping of potato chip color and tuber traits within an autotetraploid family
  33. Marker-assisted selection provides arabica coffee with genes from other Coffea species targeting on multiple resistance to rust and coffee berry disease
  34. Functional marker related to germination vigor of maize seed
  35. Cereal flag leaf adaptations for grain yield under drought: knowledge status and gaps
  36. Precise mapping of a quantitative trait locus interval for spike length and grain weight in bread wheat ( Triticum aestivum L.)
  37. Loss of function of OsMADS34 leads to large sterile lemma and low grain yield in rice ( Oryza sativa L.)
  38. De novo transcriptome sequencing-based discovery and expression analyses of verbascoside biosynthesis-associated genes in Rehmannia glutinosa tuberous roots
  39. Superoxide dismutase multigene family in longan somatic embryos: a comparison of CuZn-SOD, Fe-SOD, and Mn-SOD gene structure, splicing, phylogeny, and expression
  40. Identification of a complete set of functional markers for the selection of er1 powdery mildew resistance in Pisum sativum L.
  41. Optimized breeding strategies for multiple trait integration: II. Process efficiency in event pyramiding and trait fixation
  42. QTL mapping for yield and photosynthetic related traits under different water regimes in wheat
  43. Tan spot susceptibility governed by the Tsn1 locus and race-nonspecific resistance quantitative trait loci in a population derived from the wheat lines Salamouni and Katepwa
Search Result: