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Title of Journal: Mol Breeding

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Abbravation: Molecular Breeding

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Springer Netherlands

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DOI

10.1007/bf03004041

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ISSN

1572-9788

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De novo transcriptome sequencingbased discovery a

Authors: Yanqing Zhou Xiangnan Wang Wanshen Wang Hongying Duan
Publish Date: 2016/09/21
Volume: 36, Issue: 10, Pages: 139-
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Abstract

Verbascoside is a phenylethanoid glycoside found in many plant species and possessing some pharmacologically beneficial activities for human health The tentative pathway and early steps of verbascoside biosynthesis have been documented but key enzymes and their corresponding genes await discovery We aimed to discover and analyze verbascoside biosynthesisassociated genes The combined Rehmannia glutinosa tuberous root transcriptome was sequenced de novo Some verbascoside biosynthesisassociated genes were discovered by the informatics method validated by RTPCR and analyzed by qRTPCR 1498 million sequencing reads were generated and assembled de novo yielding 96961 final unigenes Of them 11848 unigenes were mapped to 280 KEGG pathways and 19 genes were assigned to the verbascoside biosynthesis pathway by comparing KEGG pathways and the tentative pathway Eight genes were validated using RTPCR in the dataset qRTPCR analysis showed that they were expressed in tuberous roots and leaves of both high and low verbascoside R glutinosa cultivars and their expressions were greater in the high verbascoside cultivar than in the low one in old tuberous roots than in young ones and in leaves than in tuberous roots The differences in their relative expression levels suggest decisive roles for these enzymes in verbascoside biosynthesis The results will accelerate the understanding of the genetic basis of verbascoside biosynthesis and genetic engineering breeding in R glutinosa


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